Public Member Functions
	Impl (CARLsim *sim, const std::string &netName, SimMode prferredSimMode, LoggerMode loggerMode, int randSeed)

	~Impl ()

void	biasWeights (short int connId, float bias, bool updateWeightRange)

short int	connect (int grpId1, int grpId2, const std::string &connType, const RangeWeight &wt, float connProb, const RangeDelay &delay, const RadiusRF &radRF, bool synWtType, float mulSynFast, float mulSynSlow)

short int	connect (int grpId1, int grpId2, ConnectionGenerator *conn, bool synWtType)

short int	connect (int grpId1, int grpId2, ConnectionGenerator *conn, float mulSynFast, float mulSynSlow, bool synWtType)

short int	connectCompartments (int grpIdLower, int grpIdUpper)

int	createGroup (const std::string &grpName, int nNeur, int neurType, int preferredPartition, ComputingBackend preferredBackend)

int	createGroup (const std::string &grpName, const Grid3D &grid, int neurType, int preferredPartition, ComputingBackend preferredBackend)

int	createGroupLIF (const std::string &grpName, int nNeur, int neurType, int preferredPartition=ANY, ComputingBackend preferredBackend=CPU_CORES)

int	createGroupLIF (const std::string &grpName, const Grid3D &grid, int neurType, int preferredPartition, ComputingBackend preferredBackend)

int	createSpikeGeneratorGroup (const std::string &grpName, int nNeur, int neurType, int preferredPartition, ComputingBackend preferredBackend)

int	createSpikeGeneratorGroup (const std::string &grpName, const Grid3D &grid, int neurType, int preferredPartition, ComputingBackend preferredBackend)

void	findWavefrontPath (std::vector< int > &path, std::vector< float > &eligibility, int netId, int grpId, int startNId, int goalNId)

CARLsimState	getCARLsimState ()

std::vector< float >	getConductanceAMPA (int grpId)

bool	getConductanceConfig (int grpId, float &dAMPA, float &rNMDA, float &dNMDA, float &dGABAa, float &rGABAb, float &dGABAb)

bool	getConductanceConfig (int grpId, int &tdAMPA, int &trNMDA, int &tdNMDA, int &tdGABAa, int &trGABAb, int &tdGABAb)

std::vector< float >	getConductanceGABAa (int grpId)

std::vector< float >	getConductanceGABAb (int grpId)

std::vector< float >	getConductanceNMDA (int grpId)

ConnSTDPInfo	getConnSTDPInfo (int connId)

RangeDelay	getDelayRange (short int connId)

uint8_t *	getDelays (int gIDpre, int gIDpost, int &Npre, int &Npost)

int	getGroupEndNeuronId (int grpId)

Grid3D	getGroupGrid3D (int grpId)

int	getGroupId (std::string grpName)

std::string	getGroupName (int grpId)

GroupNeuromodulatorInfo	getGroupNeuromodulatorInfo (int grpId)

int	getGroupNumNeurons (int grpId)

int	getGroupStartNeuronId (int grpId)

const IcalcType	getIcalcType (int grpId)

const FILE *	getLogFpDeb ()

const FILE *	getLogFpErr ()

const FILE *	getLogFpInf ()

const FILE *	getLogFpLog ()

int	getMaxNumCompConnections ()

int	getNeuronId (int grpId, Point3D location)

Point3D	getNeuronLocation3D (int neurId)

Point3D	getNeuronLocation3D (int grpId, int relNeurId)

int	getNumConnections ()

int	getNumGroups ()

int	getNumNeurons ()

int	getNumNeuronsGen ()

int	getNumNeuronsGenExc ()

int	getNumNeuronsGenInh ()

int	getNumNeuronsReg ()

int	getNumNeuronsRegExc ()

int	getNumNeuronsRegInh ()

int	getNumSynapses ()

int	getNumSynapticConnections (short int connectionId)

int	getSimTime ()

int	getSimTimeMsec ()

int	getSimTimeSec ()

SpikeMonitor *	getSpikeMonitor (int grpId)

RangeWeight	getWeightRange (short int connId)

bool	isConnectionPlastic (short int connId)

bool	isExcitatoryGroup (int grpId)

bool	isGroupWith (int grpId, IcalcType icalcType)

bool	isGroupWithCOBA (int grpId)

bool	isGroupWithCUBA (int grpId)

bool	isGroupWithHomeostasis (int grpId)

bool	isInhibitoryGroup (int grpId)

bool	isPoissonGroup (int grpId)

bool	isSimulationWithCOBA ()

bool	isSimulationWithCUBA ()

void	loadSimulation (FILE *fid)

void	printEntrails (char *buffer, unsigned length, int gGrpIdPre, int gGrpIdPost)

int	runNetwork (int nSec, int nMsec, bool printRunSummary)

void	saveSimulation (const std::string &fileName, bool saveSynapseInfo)

void	scaleWeights (short int connId, float scale, bool updateWeightRange)

void	setACNE12 (int grpId)

void	setCompartmentParameters (int grpId, float couplingUp, float couplingDown)

void	setConductances (bool isSet)

void	setConductances (bool isSet, int tdAMPA, int tdNMDA, int tdGABAa, int tdGABAb)

void	setConductances (bool isSet, int tdAMPA, int trNMDA, int tdNMDA, int tdGABAa, int trGABAb, int tdGABAb)

void	setConductances (int grpId, bool isSet)

void	setConductances (int grpId, bool isSet, int tdAMPA, int tdNMDA, int tdGABAa, int tdGABAb)

void	setConductances (int grpId, bool isSet, int tdAMPA, int trNMDA, int tdNMDA, int tdGABAa, int trGABAb, int tdGABAb)

void	setConnectionModulation (int preGrpId, int postGrpId, IcalcType icalcType)

ConnectionMonitor *	setConnectionMonitor (int grpIdPre, int grpIdPost, const std::string &fname)

void	setDefaultConductanceTimeConstants (int tdAMPA, int trNMDA, int tdNMDA, int tdGABAa, int trGABAb, int tdGABAb)

void	setDefaultESTDPparams (float alphaPlus, float tauPlus, float alphaMinus, float tauMinus, STDPType stdpType)

void	setDefaultHomeostasisParams (float homeoScale, float avgTimeScale)

void	setDefaultISTDPparams (float betaLTP, float betaLTD, float lambda, float delta, STDPType stdpType)

void	setDefaultSaveOptions (std::string fileName, bool saveSynapseInfo)

void	setDefaultSTDPparams (float alphaPlus, float tauPlus, float alphaMinus, float tauMinus, STDPType stdpType)

void	setDefaultSTPparams (int neurType, float STP_U, float STP_tau_u, float STP_tau_x)

void	setESTDP (int preGrpId, int postGrpId, bool isSet)

void	setESTDP (int preGrpId, int postGrpId, bool isSet, STDPType type, ExpCurve curve)

void	setESTDP (int preGrpId, int postGrpId, bool isSet, STDPType type, ExpCurve curve, PkaPlcModulation modulation)

void	setESTDP (int preGrpId, int postGrpId, bool isSet, STDPType type, TimingBasedCurve curve)

void	setExternalCurrent (int grpId, const std::vector< float > &current)

void	setExternalCurrent (int grpId, float current)

GroupMonitor *	setGroupMonitor (int grpId, const std::string &fname, const int mode)

void	setHomeoBaseFiringRate (int grpId, float baseFiring, float baseFiringSD)

void	setHomeostasis (int grpId, bool isSet)

void	setHomeostasis (int grpId, bool isSet, float homeoScale, float avgTimeScale)

void	setIntegrationMethod (integrationMethod_t method, int numStepsPerMs)

void	setISTDP (int preGrpId, int postGrpId, bool isSet)

void	setISTDP (int preGrpId, int postGrpId, bool isSet, STDPType type, ExpCurve curve)

void	setISTDP (int preGrpId, int postGrpId, bool isSet, STDPType type, PulseCurve curve)

void	setLogFile (const std::string &fileName)

void	setLogsFpCustom (FILE fpInf, FILE fpErr, FILE fpDeb, FILE fpLog)

void	setNeuromodulator (int grpId, float baseDP, float tauDP, float releaseDP, bool activeDP, float base5HT, float tau5HT, float release5HT, bool active5HT, float baseACh, float tauACh, float releaseACh, bool activeACh, float baseNE, float tauNE, float releaseNE, bool activeNE)

void	setNeuromodulator (int grpId, float baseDP, float tauDP, float base5HT, float tau5HT, float baseACh, float tauACh, float baseNE, float tauNE)

void	setNeuromodulator (int grpId, float tauDP, float tau5HT, float tauACh, float tauNE)

NeuronMonitor *	setNeuronMonitor (int grpId, const std::string &fileName)

void	setNeuronParameters (int grpId, float izh_a, float izh_a_sd, float izh_b, float izh_b_sd, float izh_c, float izh_c_sd, float izh_d, float izh_d_sd)

void	setNeuronParameters (int grpId, float izh_a, float izh_b, float izh_c, float izh_d)

void	setNeuronParameters (int grpId, float izh_C, float izh_k, float izh_vr, float izh_vt, float izh_a, float izh_b, float izh_vpeak, float izh_c, float izh_d)

void	setNeuronParameters (int grpId, float izh_C, float izh_C_sd, float izh_k, float izh_k_sd, float izh_vr, float izh_vr_sd, float izh_vt, float izh_vt_sd, float izh_a, float izh_a_sd, float izh_b, float izh_b_sd, float izh_vpeak, float izh_vpeak_sd, float izh_c, float izh_c_sd, float izh_d, float izh_d_sd)

void	setNeuronParametersLIF (int grpId, int tau_m, int tau_ref, float vTh, float vReset, const RangeRmem &rMem)

void	setNM4STP (int grpId, float wSTP_U[], float wSTP_tau_u[], float wSTP_tau_x[])

void	setNM4weighted (int grpId, IcalcType icalc, float wDA, float w5HT, float wACh, float wNE, float wNorm, float wBase)

void	setSpikeGenerator (int grpId, SpikeGenerator *spikeGenFunc)

SpikeMonitor *	setSpikeMonitor (int grpId, const std::string &fileName)

void	setSpikeRate (int grpId, PoissonRate *spikeRate, int refPeriod)

void	setSTDP (int preGrpId, int postGrpId, bool isSet)

void	setSTDP (int preGrpId, int postGrpId, bool isSet, STDPType type, float alphaPlus, float tauPlus, float alphaMinus, float tauMinus)

void	setSTP (int grpId, bool isSet)

void	setSTP (int grpId, bool isSet, float STP_U, float STP_tau_u, float STP_tau_x)

void	setupNetwork ()

void	setWeight (short int connId, int neurIdPre, int neurIdPost, float weight, bool updateWeightRange)

void	setWeightAndWeightChangeUpdate (UpdateInterval wtANDwtChangeUpdateInterval, bool enableWtChangeDecay, float wtChangeDecay)

void	startTesting (bool updateWeights)

void	stopTesting ()

bool	updateDelays (int gGrpIdPre, int gGrpIdPost, std::vector< std::tuple< int, int, uint8_t >> connDelays)

Detailed Description

Definition at line 79 of file carlsim.cpp.

Constructor & Destructor Documentation

◆ Impl()

Impl	(	CARLsim *	sim,
		const std::string &	netName,
		SimMode	prferredSimMode,
		LoggerMode	loggerMode,
		int	randSeed
	)

inline

Definition at line 83 of file carlsim.cpp.

◆ ~Impl()

~Impl ( )

inline

Definition at line 106 of file carlsim.cpp.

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Member Function Documentation

◆ biasWeights()

void biasWeights	(	short int	connId,
		float	bias,
		bool	updateWeightRange
	)

inline

Definition at line 1138 of file carlsim.cpp.

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◆ connect() [1/3]

short int connect	(	int	grpId1,
		int	grpId2,
		const std::string &	connType,
		const RangeWeight &	wt,
		float	connProb,
		const RangeDelay &	delay,
		const RadiusRF &	radRF,
		bool	synWtType,
		float	mulSynFast,
		float	mulSynSlow
	)

inline

Definition at line 150 of file carlsim.cpp.

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◆ connect() [2/3]

short int connect	(	int	grpId1,
		int	grpId2,
		ConnectionGenerator *	conn,
		bool	synWtType
	)

inline

Definition at line 209 of file carlsim.cpp.

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◆ connect() [3/3]

short int connect	(	int	grpId1,
		int	grpId2,
		ConnectionGenerator *	conn,
		float	mulSynFast,
		float	mulSynSlow,
		bool	synWtType
	)

inline

Definition at line 241 of file carlsim.cpp.

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◆ connectCompartments()

short int connectCompartments	(	int	grpIdLower,
		int	grpIdUpper
	)

inline

Definition at line 275 of file carlsim.cpp.

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◆ createGroup() [1/2]

int createGroup	(	const std::string &	grpName,
		int	nNeur,
		int	neurType,
		int	preferredPartition,
		ComputingBackend	preferredBackend
	)

inline

Definition at line 336 of file carlsim.cpp.

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◆ createGroup() [2/2]

int createGroup	(	const std::string &	grpName,
		const Grid3D &	grid,
		int	neurType,
		int	preferredPartition,
		ComputingBackend	preferredBackend
	)

inline

Definition at line 346 of file carlsim.cpp.

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◆ createGroupLIF() [1/2]

int createGroupLIF	(	const std::string &	grpName,
		int	nNeur,
		int	neurType,
		int	preferredPartition = `ANY`,
		ComputingBackend	preferredBackend = `CPU_CORES`
	)

inline

Definition at line 341 of file carlsim.cpp.

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◆ createGroupLIF() [2/2]

int createGroupLIF	(	const std::string &	grpName,
		const Grid3D &	grid,
		int	neurType,
		int	preferredPartition,
		ComputingBackend	preferredBackend
	)

inline

Definition at line 384 of file carlsim.cpp.

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◆ createSpikeGeneratorGroup() [1/2]

int createSpikeGeneratorGroup	(	const std::string &	grpName,
		int	nNeur,
		int	neurType,
		int	preferredPartition,
		ComputingBackend	preferredBackend
	)

inline

Definition at line 422 of file carlsim.cpp.

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◆ createSpikeGeneratorGroup() [2/2]

int createSpikeGeneratorGroup	(	const std::string &	grpName,
		const Grid3D &	grid,
		int	neurType,
		int	preferredPartition,
		ComputingBackend	preferredBackend
	)

inline

Definition at line 427 of file carlsim.cpp.

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◆ findWavefrontPath()

void findWavefrontPath	(	std::vector< int > &	path,
		std::vector< float > &	eligibility,
		int	netId,
		int	grpId,
		int	startNId,
		int	goalNId
	)

inline

Definition at line 1418 of file carlsim.cpp.

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◆ getCARLsimState()

CARLsimState getCARLsimState ( )

inline

Definition at line 1400 of file carlsim.cpp.

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◆ getConductanceAMPA()

std::vector<float> getConductanceAMPA ( int grpId )

inline

Definition at line 1432 of file carlsim.cpp.

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◆ getConductanceConfig() [1/2]

bool getConductanceConfig	(	int	grpId,
		float &	dAMPA,
		float &	rNMDA,
		float &	dNMDA,
		float &	dGABAa,
		float &	rGABAb,
		float &	dGABAb
	)

inline

Definition at line 1693 of file carlsim.cpp.

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◆ getConductanceConfig() [2/2]

bool getConductanceConfig	(	int	grpId,
		int &	tdAMPA,
		int &	trNMDA,
		int &	tdNMDA,
		int &	tdGABAa,
		int &	trGABAb,
		int &	tdGABAb
	)

inline

Definition at line 1703 of file carlsim.cpp.

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◆ getConductanceGABAa()

std::vector<float> getConductanceGABAa ( int grpId )

inline

Definition at line 1454 of file carlsim.cpp.

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◆ getConductanceGABAb()

std::vector<float> getConductanceGABAb ( int grpId )

inline

Definition at line 1465 of file carlsim.cpp.

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◆ getConductanceNMDA()

std::vector<float> getConductanceNMDA ( int grpId )

inline

Definition at line 1443 of file carlsim.cpp.

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◆ getConnSTDPInfo()

ConnSTDPInfo getConnSTDPInfo ( int connId )

inline

Definition at line 1614 of file carlsim.cpp.

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◆ getDelayRange()

RangeDelay getDelayRange ( short int connId )

inline

Definition at line 1476 of file carlsim.cpp.

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◆ getDelays()

uint8_t* getDelays	(	int	gIDpre,
		int	gIDpost,
		int &	Npre,
		int &	Npost
	)

inline

Definition at line 1485 of file carlsim.cpp.

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◆ getGroupEndNeuronId()

int getGroupEndNeuronId ( int grpId )

inline

Definition at line 1528 of file carlsim.cpp.

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◆ getGroupGrid3D()

Grid3D getGroupGrid3D ( int grpId )

inline

Definition at line 1497 of file carlsim.cpp.

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◆ getGroupId()

int getGroupId ( std::string grpName )

inline

Definition at line 1506 of file carlsim.cpp.

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◆ getGroupName()

std::string getGroupName ( int grpId )

inline

Definition at line 1510 of file carlsim.cpp.

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◆ getGroupNeuromodulatorInfo()

GroupNeuromodulatorInfo getGroupNeuromodulatorInfo ( int grpId )

inline

Definition at line 1622 of file carlsim.cpp.

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◆ getGroupNumNeurons()

int getGroupNumNeurons ( int grpId )

inline

Definition at line 1538 of file carlsim.cpp.

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◆ getGroupStartNeuronId()

int getGroupStartNeuronId ( int grpId )

inline

Definition at line 1518 of file carlsim.cpp.

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◆ getIcalcType()

const IcalcType getIcalcType ( int grpId )

inline

Definition at line 1686 of file carlsim.cpp.

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◆ getLogFpDeb()

const FILE* getLogFpDeb ( )

inline

Definition at line 1090 of file carlsim.cpp.

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◆ getLogFpErr()

const FILE* getLogFpErr ( )

inline

Definition at line 1089 of file carlsim.cpp.

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◆ getLogFpInf()

const FILE* getLogFpInf ( )

inline

Definition at line 1088 of file carlsim.cpp.

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◆ getLogFpLog()

const FILE* getLogFpLog ( )

inline

Definition at line 1091 of file carlsim.cpp.

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◆ getMaxNumCompConnections()

int getMaxNumCompConnections ( )

inline

Definition at line 1585 of file carlsim.cpp.

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◆ getNeuronId()

int getNeuronId	(	int	grpId,
		Point3D	location
	)

inline

Definition at line 1570 of file carlsim.cpp.

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◆ getNeuronLocation3D() [1/2]

Point3D getNeuronLocation3D ( int neurId )

inline

Definition at line 1546 of file carlsim.cpp.

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◆ getNeuronLocation3D() [2/2]

Point3D getNeuronLocation3D	(	int	grpId,
		int	relNeurId
	)

inline

Definition at line 1557 of file carlsim.cpp.

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◆ getNumConnections()

int getNumConnections ( )

inline

Definition at line 1584 of file carlsim.cpp.

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◆ getNumGroups()

int getNumGroups ( )

inline

Definition at line 1587 of file carlsim.cpp.

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◆ getNumNeurons()

int getNumNeurons ( )

inline

Definition at line 1588 of file carlsim.cpp.

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◆ getNumNeuronsGen()

int getNumNeuronsGen ( )

inline

Definition at line 1592 of file carlsim.cpp.

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◆ getNumNeuronsGenExc()

int getNumNeuronsGenExc ( )

inline

Definition at line 1593 of file carlsim.cpp.

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◆ getNumNeuronsGenInh()

int getNumNeuronsGenInh ( )

inline

Definition at line 1594 of file carlsim.cpp.

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◆ getNumNeuronsReg()

int getNumNeuronsReg ( )

inline

Definition at line 1589 of file carlsim.cpp.

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◆ getNumNeuronsRegExc()

int getNumNeuronsRegExc ( )

inline

Definition at line 1590 of file carlsim.cpp.

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◆ getNumNeuronsRegInh()

int getNumNeuronsRegInh ( )

inline

Definition at line 1591 of file carlsim.cpp.

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◆ getNumSynapses()

int getNumSynapses ( )

inline

Definition at line 1606 of file carlsim.cpp.

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◆ getNumSynapticConnections()

int getNumSynapticConnections ( short int connectionId )

inline

Definition at line 1596 of file carlsim.cpp.

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◆ getSimTime()

int getSimTime ( )

inline

Definition at line 1629 of file carlsim.cpp.

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◆ getSimTimeMsec()

int getSimTimeMsec ( )

inline

Definition at line 1631 of file carlsim.cpp.

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◆ getSimTimeSec()

int getSimTimeSec ( )

inline

Definition at line 1630 of file carlsim.cpp.

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◆ getSpikeMonitor()

SpikeMonitor* getSpikeMonitor ( int grpId )

inline

Definition at line 1634 of file carlsim.cpp.

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◆ getWeightRange()

RangeWeight getWeightRange ( short int connId )

inline

Definition at line 1642 of file carlsim.cpp.

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◆ isConnectionPlastic()

bool isConnectionPlastic ( short int connId )

inline

Definition at line 1650 of file carlsim.cpp.

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◆ isExcitatoryGroup()

bool isExcitatoryGroup ( int grpId )

inline

Definition at line 1730 of file carlsim.cpp.

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◆ isGroupWith()

bool isGroupWith	(	int	grpId,
		IcalcType	icalcType
	)

inline

Definition at line 1680 of file carlsim.cpp.

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◆ isGroupWithCOBA()

bool isGroupWithCOBA ( int grpId )

inline

Definition at line 1715 of file carlsim.cpp.

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◆ isGroupWithCUBA()

bool isGroupWithCUBA ( int grpId )

inline

Definition at line 1721 of file carlsim.cpp.

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◆ isGroupWithHomeostasis()

bool isGroupWithHomeostasis ( int grpId )

inline

Definition at line 1658 of file carlsim.cpp.

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◆ isInhibitoryGroup()

bool isInhibitoryGroup ( int grpId )

inline

Definition at line 1738 of file carlsim.cpp.

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◆ isPoissonGroup()

bool isPoissonGroup ( int grpId )

inline

Definition at line 1746 of file carlsim.cpp.

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◆ isSimulationWithCOBA()

bool isSimulationWithCOBA ( )

inline

Definition at line 1666 of file carlsim.cpp.

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◆ isSimulationWithCUBA()

bool isSimulationWithCUBA ( )

inline

Definition at line 1672 of file carlsim.cpp.

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◆ loadSimulation()

void loadSimulation ( FILE * fid )

inline

Definition at line 1164 of file carlsim.cpp.

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◆ printEntrails()

void printEntrails	(	char *	buffer,
		unsigned	length,
		int	gGrpIdPre,
		int	gGrpIdPost
	)

inline

Definition at line 1426 of file carlsim.cpp.

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◆ runNetwork()

int runNetwork	(	int	nSec,
		int	nMsec,
		bool	printRunSummary
	)

inline

Definition at line 1042 of file carlsim.cpp.

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◆ saveSimulation()

void saveSimulation	(	const std::string &	fileName,
		bool	saveSynapseInfo
	)

inline

Definition at line 1093 of file carlsim.cpp.

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◆ scaleWeights()

void scaleWeights	(	short int	connId,
		float	scale,
		bool	updateWeightRange
	)

inline

Definition at line 1173 of file carlsim.cpp.

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◆ setACNE12()

void setACNE12 ( int grpId )

inline

Definition at line 588 of file carlsim.cpp.

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◆ setCompartmentParameters()

void setCompartmentParameters	(	int	grpId,
		float	couplingUp,
		float	couplingDown
	)

inline

Definition at line 445 of file carlsim.cpp.

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◆ setConductances() [1/6]

void setConductances ( bool isSet )

inline

Definition at line 456 of file carlsim.cpp.

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◆ setConductances() [2/6]

void setConductances	(	bool	isSet,
		int	tdAMPA,
		int	tdNMDA,
		int	tdGABAa,
		int	tdGABAb
	)

inline

Definition at line 471 of file carlsim.cpp.

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◆ setConductances() [3/6]

void setConductances	(	bool	isSet,
		int	tdAMPA,
		int	trNMDA,
		int	tdNMDA,
		int	tdGABAa,
		int	trGABAb,
		int	tdGABAb
	)

inline

Definition at line 491 of file carlsim.cpp.

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◆ setConductances() [4/6]

void setConductances	(	int	grpId,
		bool	isSet
	)

inline

Definition at line 523 of file carlsim.cpp.

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◆ setConductances() [5/6]

void setConductances	(	int	grpId,
		bool	isSet,
		int	tdAMPA,
		int	tdNMDA,
		int	tdGABAa,
		int	tdGABAb
	)

inline

Definition at line 539 of file carlsim.cpp.

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◆ setConductances() [6/6]

void setConductances	(	int	grpId,
		bool	isSet,
		int	tdAMPA,
		int	trNMDA,
		int	tdNMDA,
		int	tdGABAa,
		int	trGABAb,
		int	tdGABAb
	)

inline

Definition at line 559 of file carlsim.cpp.

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◆ setConnectionModulation()

void setConnectionModulation	(	int	preGrpId,
		int	postGrpId,
		IcalcType	icalcType
	)

inline

Definition at line 879 of file carlsim.cpp.

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◆ setConnectionMonitor()

ConnectionMonitor* setConnectionMonitor	(	int	grpIdPre,
		int	grpIdPost,
		const std::string &	fname
	)

inline

Definition at line 1186 of file carlsim.cpp.

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◆ setDefaultConductanceTimeConstants()

void setDefaultConductanceTimeConstants	(	int	tdAMPA,
		int	trNMDA,
		int	tdNMDA,
		int	tdGABAa,
		int	trGABAb,
		int	tdGABAb
	)

inline

Definition at line 1758 of file carlsim.cpp.

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◆ setDefaultESTDPparams()

void setDefaultESTDPparams	(	float	alphaPlus,
		float	tauPlus,
		float	alphaMinus,
		float	tauMinus,
		STDPType	stdpType
	)

inline

Definition at line 1814 of file carlsim.cpp.

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◆ setDefaultHomeostasisParams()

void setDefaultHomeostasisParams	(	float	homeoScale,
		float	avgTimeScale
	)

inline

Definition at line 1783 of file carlsim.cpp.

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◆ setDefaultISTDPparams()

void setDefaultISTDPparams	(	float	betaLTP,
		float	betaLTD,
		float	lambda,
		float	delta,
		STDPType	stdpType
	)

inline

Definition at line 1842 of file carlsim.cpp.

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◆ setDefaultSaveOptions()

void setDefaultSaveOptions	(	std::string	fileName,
		bool	saveSynapseInfo
	)

inline

Definition at line 1793 of file carlsim.cpp.

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◆ setDefaultSTDPparams()

void setDefaultSTDPparams	(	float	alphaPlus,
		float	tauPlus,
		float	alphaMinus,
		float	tauMinus,
		STDPType	stdpType
	)

inline

Definition at line 1809 of file carlsim.cpp.

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◆ setDefaultSTPparams()

void setDefaultSTPparams	(	int	neurType,
		float	STP_U,
		float	STP_tau_u,
		float	STP_tau_x
	)

inline

Definition at line 1869 of file carlsim.cpp.

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◆ setESTDP() [1/4]

void setESTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet
	)

inline

Definition at line 819 of file carlsim.cpp.

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◆ setESTDP() [2/4]

void setESTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet,
		STDPType	type,
		ExpCurve	curve
	)

inline

Definition at line 837 of file carlsim.cpp.

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◆ setESTDP() [3/4]

void setESTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet,
		STDPType	type,
		ExpCurve	curve,
		PkaPlcModulation	modulation
	)

inline

Definition at line 857 of file carlsim.cpp.

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◆ setESTDP() [4/4]

void setESTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet,
		STDPType	type,
		TimingBasedCurve	curve
	)

inline

Definition at line 887 of file carlsim.cpp.

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◆ setExternalCurrent() [1/2]

void setExternalCurrent	(	int	grpId,
		const std::vector< float > &	current
	)

inline

Definition at line 1223 of file carlsim.cpp.

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◆ setExternalCurrent() [2/2]

void setExternalCurrent	(	int	grpId,
		float	current
	)

inline

Definition at line 1235 of file carlsim.cpp.

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◆ setGroupMonitor()

GroupMonitor* setGroupMonitor	(	int	grpId,
		const std::string &	fname,
		const int	mode
	)

inline

Definition at line 1247 of file carlsim.cpp.

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◆ setHomeoBaseFiringRate()

void setHomeoBaseFiringRate	(	int	grpId,
		float	baseFiring,
		float	baseFiringSD
	)

inline

Definition at line 650 of file carlsim.cpp.

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◆ setHomeostasis() [1/2]

void setHomeostasis	(	int	grpId,
		bool	isSet
	)

inline

Definition at line 610 of file carlsim.cpp.

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◆ setHomeostasis() [2/2]

void setHomeostasis	(	int	grpId,
		bool	isSet,
		float	homeoScale,
		float	avgTimeScale
	)

inline

Definition at line 630 of file carlsim.cpp.

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◆ setIntegrationMethod()

void setIntegrationMethod	(	integrationMethod_t	method,
		int	numStepsPerMs
	)

inline

Definition at line 664 of file carlsim.cpp.

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◆ setISTDP() [1/3]

void setISTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet
	)

inline

Definition at line 906 of file carlsim.cpp.

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◆ setISTDP() [2/3]

void setISTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet,
		STDPType	type,
		ExpCurve	curve
	)

inline

Definition at line 924 of file carlsim.cpp.

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◆ setISTDP() [3/3]

void setISTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet,
		STDPType	type,
		PulseCurve	curve
	)

inline

Definition at line 943 of file carlsim.cpp.

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◆ setLogFile()

void setLogFile ( const std::string & fileName )

inline

Definition at line 1105 of file carlsim.cpp.

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◆ setLogsFpCustom()

void setLogsFpCustom	(	FILE *	fpInf,
		FILE *	fpErr,
		FILE *	fpDeb,
		FILE *	fpLog
	)

inline

Definition at line 1128 of file carlsim.cpp.

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◆ setNeuromodulator() [1/3]

void setNeuromodulator	(	int	grpId,
		float	baseDP,
		float	tauDP,
		float	releaseDP,
		bool	activeDP,
		float	base5HT,
		float	tau5HT,
		float	release5HT,
		bool	active5HT,
		float	baseACh,
		float	tauACh,
		float	releaseACh,
		bool	activeACh,
		float	baseNE,
		float	tauNE,
		float	releaseNE,
		bool	activeNE
	)

inline

Definition at line 750 of file carlsim.cpp.

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◆ setNeuromodulator() [2/3]

void setNeuromodulator	(	int	grpId,
		float	baseDP,
		float	tauDP,
		float	base5HT,
		float	tau5HT,
		float	baseACh,
		float	tauACh,
		float	baseNE,
		float	tauNE
	)

inline

Definition at line 776 of file carlsim.cpp.

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◆ setNeuromodulator() [3/3]

void setNeuromodulator	(	int	grpId,
		float	tauDP,
		float	tau5HT,
		float	tauACh,
		float	tauNE
	)

inline

Definition at line 794 of file carlsim.cpp.

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◆ setNeuronMonitor()

NeuronMonitor* setNeuronMonitor	(	int	grpId,
		const std::string &	fileName
	)

inline

Definition at line 1333 of file carlsim.cpp.

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◆ setNeuronParameters() [1/4]

void setNeuronParameters	(	int	grpId,
		float	izh_a,
		float	izh_a_sd,
		float	izh_b,
		float	izh_b_sd,
		float	izh_c,
		float	izh_c_sd,
		float	izh_d,
		float	izh_d_sd
	)

inline

Definition at line 677 of file carlsim.cpp.

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◆ setNeuronParameters() [2/4]

void setNeuronParameters	(	int	grpId,
		float	izh_a,
		float	izh_b,
		float	izh_c,
		float	izh_d
	)

inline

Definition at line 690 of file carlsim.cpp.

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◆ setNeuronParameters() [3/4]

void setNeuronParameters	(	int	grpId,
		float	izh_C,
		float	izh_k,
		float	izh_vr,
		float	izh_vt,
		float	izh_a,
		float	izh_b,
		float	izh_vpeak,
		float	izh_c,
		float	izh_d
	)

inline

Definition at line 700 of file carlsim.cpp.

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◆ setNeuronParameters() [4/4]

void setNeuronParameters	(	int	grpId,
		float	izh_C,
		float	izh_C_sd,
		float	izh_k,
		float	izh_k_sd,
		float	izh_vr,
		float	izh_vr_sd,
		float	izh_vt,
		float	izh_vt_sd,
		float	izh_a,
		float	izh_a_sd,
		float	izh_b,
		float	izh_b_sd,
		float	izh_vpeak,
		float	izh_vpeak_sd,
		float	izh_c,
		float	izh_c_sd,
		float	izh_d,
		float	izh_d_sd
	)

inline

Definition at line 714 of file carlsim.cpp.

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◆ setNeuronParametersLIF()

void setNeuronParametersLIF	(	int	grpId,
		int	tau_m,
		int	tau_ref,
		float	vTh,
		float	vReset,
		const RangeRmem &	rMem
	)

inline

Definition at line 731 of file carlsim.cpp.

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◆ setNM4STP()

void setNM4STP	(	int	grpId,
		float	wSTP_U[],
		float	wSTP_tau_u[],
		float	wSTP_tau_x[]
	)

inline

Definition at line 1005 of file carlsim.cpp.

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◆ setNM4weighted()

void setNM4weighted	(	int	grpId,
		IcalcType	icalc,
		float	wDA,
		float	w5HT,
		float	wACh,
		float	wNE,
		float	wNorm,
		float	wBase
	)

inline

Definition at line 593 of file carlsim.cpp.

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◆ setSpikeGenerator()

void setSpikeGenerator	(	int	grpId,
		SpikeGenerator *	spikeGenFunc
	)

inline

Definition at line 1282 of file carlsim.cpp.

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◆ setSpikeMonitor()

SpikeMonitor* setSpikeMonitor	(	int	grpId,
		const std::string &	fileName
	)

inline

Definition at line 1297 of file carlsim.cpp.

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◆ setSpikeRate()

void setSpikeRate	(	int	grpId,
		PoissonRate *	spikeRate,
		int	refPeriod
	)

inline

TODO:: : make sure spikeRate->isOnGPU() consistent with simulation mode

Definition at line 1371 of file carlsim.cpp.

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◆ setSTDP() [1/2]

void setSTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet
	)

inline

Definition at line 807 of file carlsim.cpp.

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◆ setSTDP() [2/2]

void setSTDP	(	int	preGrpId,
		int	postGrpId,
		bool	isSet,
		STDPType	type,
		float	alphaPlus,
		float	tauPlus,
		float	alphaMinus,
		float	tauMinus
	)

inline

Definition at line 812 of file carlsim.cpp.

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◆ setSTP() [1/2]

void setSTP	(	int	grpId,
		bool	isSet
	)

inline

Definition at line 961 of file carlsim.cpp.

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◆ setSTP() [2/2]

void setSTP	(	int	grpId,
		bool	isSet,
		float	STP_U,
		float	STP_tau_u,
		float	STP_tau_x
	)

inline

Definition at line 985 of file carlsim.cpp.

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◆ setupNetwork()

void setupNetwork ( )

inline

Definition at line 1064 of file carlsim.cpp.

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◆ setWeight()

void setWeight	(	short int	connId,
		int	neurIdPre,
		int	neurIdPost,
		float	weight,
		bool	updateWeightRange
	)

inline

Definition at line 1385 of file carlsim.cpp.

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◆ setWeightAndWeightChangeUpdate()

void setWeightAndWeightChangeUpdate	(	UpdateInterval	wtANDwtChangeUpdateInterval,
		bool	enableWtChangeDecay,
		float	wtChangeDecay
	)

inline

Definition at line 1026 of file carlsim.cpp.

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◆ startTesting()

void startTesting ( bool updateWeights )

inline

Definition at line 1149 of file carlsim.cpp.

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◆ stopTesting()

void stopTesting ( )

inline

Definition at line 1156 of file carlsim.cpp.

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◆ updateDelays()

bool updateDelays	(	int	gGrpIdPre,
		int	gGrpIdPost,
		std::vector< std::tuple< int, int, uint8_t >>	connDelays
	)

inline

Definition at line 1422 of file carlsim.cpp.

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The documentation for this class was generated from the following file:

carlsim.cpp

Public Member Functions

Detailed Description

Constructor & Destructor Documentation

◆ Impl()

◆ ~Impl()

Member Function Documentation

◆ biasWeights()

◆ connect() [1/3]

◆ connect() [2/3]

◆ connect() [3/3]

◆ connectCompartments()

◆ createGroup() [1/2]

◆ createGroup() [2/2]

◆ createGroupLIF() [1/2]

◆ createGroupLIF() [2/2]

◆ createSpikeGeneratorGroup() [1/2]

◆ createSpikeGeneratorGroup() [2/2]

◆ findWavefrontPath()

◆ getCARLsimState()

◆ getConductanceAMPA()

◆ getConductanceConfig() [1/2]

◆ getConductanceConfig() [2/2]

◆ getConductanceGABAa()

◆ getConductanceGABAb()

◆ getConductanceNMDA()

◆ getConnSTDPInfo()

◆ getDelayRange()

◆ getDelays()

◆ getGroupEndNeuronId()

◆ getGroupGrid3D()

◆ getGroupId()

◆ getGroupName()

◆ getGroupNeuromodulatorInfo()

◆ getGroupNumNeurons()

◆ getGroupStartNeuronId()

◆ getIcalcType()

◆ getLogFpDeb()

◆ getLogFpErr()

◆ getLogFpInf()

◆ getLogFpLog()

◆ getMaxNumCompConnections()

◆ getNeuronId()

◆ getNeuronLocation3D() [1/2]

◆ getNeuronLocation3D() [2/2]

◆ getNumConnections()

◆ getNumGroups()

◆ getNumNeurons()

◆ getNumNeuronsGen()

◆ getNumNeuronsGenExc()

◆ getNumNeuronsGenInh()

◆ getNumNeuronsReg()

◆ getNumNeuronsRegExc()

◆ getNumNeuronsRegInh()

◆ getNumSynapses()

◆ getNumSynapticConnections()

◆ getSimTime()

◆ getSimTimeMsec()

◆ getSimTimeSec()

◆ getSpikeMonitor()

◆ getWeightRange()

◆ isConnectionPlastic()

◆ isExcitatoryGroup()

◆ isGroupWith()

◆ isGroupWithCOBA()

◆ isGroupWithCUBA()

◆ isGroupWithHomeostasis()

◆ isInhibitoryGroup()

◆ isPoissonGroup()

◆ isSimulationWithCOBA()

◆ isSimulationWithCUBA()

◆ loadSimulation()

◆ printEntrails()

◆ runNetwork()

◆ saveSimulation()

◆ scaleWeights()

◆ setACNE12()

◆ setCompartmentParameters()

◆ setConductances() [1/6]

◆ setConductances() [2/6]

◆ setConductances() [3/6]